Supplement for the Article:
Boolean network inference from time series data incorporating prior biological knowledge
Saad Haider, Ranadip Pal BMC Genomics 2012, 13(Suppl 6):S9 (26 October 2012)
Comparison with Synthetic Networks
Comparison with REVEAL (Liang et al.) and MDL (Zhao et al.)
Table Caption (as word doc) Table as XLS
Data_To_Generate_BN1 | BN1 Diagram | BN2_1path Diagram | BN2_2path Diagram | BN2_3path Diagram | R_max_1path | R_max_2path | R_max_3path | R_mean_1path_4transitions | R_mean_2path_4transitions | R_mean_3path_4transitions | R_mean_1path_5transitions | R_mean_2path_5transitions | R_mean_3path_5transitions |
bn001.txt | BN1_001.jpg | BN2_1path_001.jpg | BN2_2path_001.jpg | BN2_3path_001.jpg | 0.44394 | 0.78788 | 1 | 0.28349 | 0.5907 | 0.66221 | 0.36736 | NaN | NaN |
bn002.txt | BN1_002.jpg | BN2_1path_002.jpg | BN2_2path_002.jpg | BN2_3path_002.jpg | 0.29115 | 0.87757 | 1 | 0.16349 | 0.50843 | 0.60393 | 0.26166 | NaN | NaN |
bn003.txt | BN1_003.jpg | BN2_1path_003.jpg | BN2_2path_003.jpg | BN2_3path_003.jpg | 0.26825 | 0.87143 | 1 | 0.12968 | 0.44803 | 0.62231 | 0.18576 | 0.60754 | 0.70961 |
bn004.txt | BN1_004.jpg | BN2_1path_004.jpg | BN2_2path_004.jpg | BN2_3path_004.jpg | 0.29845 | 0.72121 | 0.82815 | 0.12288 | 0.4268 | 0.52283 | 0.21256 | NaN | NaN |
bn005.txt | BN1_005.jpg | BN2_1path_005.jpg | BN2_2path_005.jpg | BN2_3path_005.jpg | 0.43552 | 1 | 1 | 0.17403 | 0.61807 | 0.58723 | 0.29192 | NaN | NaN |
bn006.txt | BN1_006.jpg | BN2_1path_006.jpg | BN2_2path_006.jpg | BN2_3path_006.jpg | 0.24008 | 0.63987 | 0.79019 | 0.14043 | 0.34367 | 0.4728 | 0.19096 | NaN | NaN |
bn007.txt | BN1_007.jpg | BN2_1path_007.jpg | BN2_2path_007.jpg | BN2_3path_007.jpg | 0.31959 | 0.87371 | 1 | 0.16716 | 0.48927 | 0.52189 | 0.23342 | NaN | NaN |
bn008.txt | BN1_008.jpg | BN2_1path_008.jpg | BN2_2path_008.jpg | BN2_3path_008.jpg | 0.23146 | 0.58408 | 0.73018 | 0.12166 | 0.27219 | 0.35811 | 0.16952 | NaN | NaN |
bn009.txt | BN1_009.jpg | BN2_1path_009.jpg | BN2_2path_009.jpg | BN2_3path_009.jpg | 0.24947 | 0.63506 | 0.85275 | 0.16334 | 0.41247 | 0.53523 | 0.1964 | NaN | NaN |
bn010.txt | BN1_010.jpg | BN2_1path_010.jpg | BN2_2path_010.jpg | BN2_3path_010.jpg | 0.28083 | 0.59488 | 0.85769 | 0.16533 | NaN | NaN | 0.19984 | NaN | NaN |
bn011.txt | BN1_011.jpg | BN2_1path_011.jpg | BN2_2path_011.jpg | BN2_3path_011.jpg | 0.30263 | 0.70943 | 1 | 0.1895 | 0.48926 | 0.64692 | 0.30263 | NaN | NaN |
bn012.txt | BN1_012.jpg | BN2_1path_012.jpg | BN2_2path_012.jpg | BN2_3path_012.jpg | 0.42017 | 0.62465 | 0.79832 | 0.2644 | NaN | NaN | 0.42017 | NaN | NaN |
bn013.txt | BN1_013.jpg | BN2_1path_013.jpg | BN2_2path_013.jpg | BN2_3path_013.jpg | 0.3641 | 0.83333 | 1 | 0.27252 | NaN | NaN | 0.32412 | NaN | NaN |
bn014.txt | BN1_014.jpg | BN2_1path_014.jpg | BN2_2path_014.jpg | BN2_3path_014.jpg | 0.38585 | 0.75566 | 0.92453 | 0.21279 | 0.45799 | 0.5821 | 0.30274 | NaN | NaN |
bn015.txt | BN1_015.jpg | BN2_1path_015.jpg | BN2_2path_015.jpg | BN2_3path_015.jpg | 0.36894 | 0.88656 | 0.96366 | 0.19815 | 0.63892 | 0.70115 | 0.22397 | 0.78025 | 0.7638 |
bn016.txt | BN1_016.jpg | BN2_1path_016.jpg | BN2_2path_016.jpg | BN2_3path_016.jpg | 0.32759 | 0.6772 | 0.79598 | 0.16383 | 0.41222 | 0.4989 | 0.23398 | 0.52768 | 0.63953 |
bn017.txt | BN1_017.jpg | BN2_1path_017.jpg | BN2_2path_017.jpg | BN2_3path_017.jpg | 0.30503 | 0.57842 | 0.78163 | 0.21192 | 0.43516 | 0.49286 | 0.2721 | NaN | NaN |
bn018.txt | BN1_018.jpg | BN2_1path_018.jpg | BN2_2path_018.jpg | BN2_3path_018.jpg | 0.41317 | 0.63585 | 0.92577 | 0.25593 | NaN | NaN | 0.32969 | NaN | NaN |
bn019.txt | BN1_019.jpg | BN2_1path_019.jpg | BN2_2path_019.jpg | BN2_3path_019.jpg | 0.29798 | 0.69545 | 1 | 0.12846 | 0.37863 | 0.4836 | 0.23369 | NaN | NaN |
bn020.txt | BN1_020.jpg | BN2_1path_020.jpg | BN2_2path_020.jpg | BN2_3path_020.jpg | 0.26195 | 0.70772 | 1 | 0.14126 | 0.43435 | 0.65215 | 0.2261 | NaN | NaN |
bn021.txt | BN1_021.jpg | BN2_1path_021.jpg | BN2_2path_021.jpg | BN2_3path_021.jpg | 0.18987 | 0.45113 | 0.88186 | 0.11229 | 0.23947 | 0.35591 | 0.13145 | 0.31382 | 0.4391 |
bn022.txt | BN1_022.jpg | BN2_1path_022.jpg | BN2_2path_022.jpg | BN2_3path_022.jpg | 0.16114 | 0.5368 | 1 | 0.089421 | 0.23819 | 0.41338 | 0.10671 | 0.30083 | 0.49252 |
bn023.txt | BN1_023.jpg | BN2_1path_023.jpg | BN2_2path_023.jpg | BN2_3path_023.jpg | 0.15581 | 0.57315 | 1 | 0.090468 | 0.24865 | 0.42435 | 0.10104 | 0.30401 | 0.539 |
bn024.txt | BN1_024.jpg | BN2_1path_024.jpg | BN2_2path_024.jpg | BN2_3path_024.jpg | 0.15734 | 0.54869 | 1 | 0.079826 | 0.21652 | 0.42876 | 0.10613 | 0.31592 | 0.56063 |
bn025.txt | BN1_025.jpg | BN2_1path_025.jpg | BN2_2path_025.jpg | BN2_3path_025.jpg | 0.30049 | 0.94847 | 1 | 0.11134 | 0.30006 | 0.40014 | 0.20727 | NaN | NaN |
bn026.txt | BN1_026.jpg | BN2_1path_026.jpg | BN2_2path_026.jpg | BN2_3path_026.jpg | 0.17533 | 0.51186 | 0.82719 | 0.086689 | 0.2227 | 0.35266 | 0.09797 | 0.25669 | 0.38266 |
bn027.txt | BN1_027.jpg | BN2_1path_027.jpg | BN2_2path_027.jpg | BN2_3path_027.jpg | 0.18072 | 0.52175 | 1 | 0.087248 | 0.25599 | 0.39933 | 0.10192 | 0.30414 | 0.46881 |
bn028.txt | BN1_028.jpg | BN2_1path_028.jpg | BN2_2path_028.jpg | BN2_3path_028.jpg | 0.35076 | 0.57407 | 1 | 0.11002 | 0.2712 | 0.42907 | 0.1617 | NaN | NaN |
bn029.txt | BN1_029.jpg | BN2_1path_029.jpg | BN2_2path_029.jpg | BN2_3path_029.jpg | 0.32554 | 0.7464 | 1 | 0.08644 | 0.24665 | 0.39496 | 0.10483 | 0.30283 | 0.46216 |
bn030.txt | BN1_030.jpg | BN2_1path_030.jpg | BN2_2path_030.jpg | BN2_3path_030.jpg | 0.17976 | 0.71937 | 1 | 0.0898 | 0.25947 | 0.42195 | 0.10304 | 0.32276 | 0.50922 |
bn031.txt | BN1_031.jpg | BN2_1path_031.jpg | BN2_2path_031.jpg | BN2_3path_031.jpg | 0.18241 | 0.64511 | 0.91376 | 0.095571 | 0.25383 | 0.38016 | 0.10172 | 0.27295 | 0.39165 |
bn032.txt | BN1_032.jpg | BN2_1path_032.jpg | BN2_2path_032.jpg | BN2_3path_032.jpg | 0.24065 | 0.75242 | 1 | 0.087549 | 0.25717 | 0.40808 | 0.12592 | 0.40771 | 0.5569 |
bn033.txt | BN1_033.jpg | BN2_1path_033.jpg | BN2_2path_033.jpg | BN2_3path_033.jpg | 0.18474 | 0.556 | 1 | 0.081961 | 0.22827 | 0.39162 | 0.11879 | 0.28639 | 0.43844 |
bn034.txt | BN1_034.jpg | BN2_1path_034.jpg | BN2_2path_034.jpg | BN2_3path_034.jpg | 0.2003 | 0.8316 | 1 | 0.095368 | 0.28628 | 0.42925 | 0.14591 | 0.30806 | 0.47759 |
bn035.txt | BN1_035.jpg | BN2_1path_035.jpg | BN2_2path_035.jpg | BN2_3path_035.jpg | 0.20992 | 0.51336 | 1 | 0.078492 | 0.24272 | 0.39863 | 0.09735 | 0.31511 | 0.48542 |
bn036.txt | BN1_036.jpg | BN2_1path_036.jpg | BN2_2path_036.jpg | BN2_3path_036.jpg | 0.17898 | 0.60866 | 1 | 0.093401 | 0.27134 | 0.41761 | 0.11721 | 0.34639 | 0.55642 |
bn037.txt | BN1_037.jpg | BN2_1path_037.jpg | BN2_2path_037.jpg | BN2_3path_037.jpg | 0.29947 | 1 | 1 | 0.078985 | 0.26167 | 0.42584 | 0.10231 | 0.30743 | 0.48125 |
bn038.txt | BN1_038.jpg | BN2_1path_038.jpg | BN2_2path_038.jpg | BN2_3path_038.jpg | 0.27003 | 0.78709 | 1 | 0.10596 | 0.27777 | 0.44139 | 0.16517 | 0.42056 | 0.60323 |
bn039.txt | BN1_039.jpg | BN2_1path_039.jpg | BN2_2path_039.jpg | BN2_3path_039.jpg | 0.15251 | 0.59489 | 1 | 0.082873 | 0.26812 | 0.43915 | 0.082058 | 0.31382 | 0.53885 |
bn040.txt | BN1_040.jpg | BN2_1path_040.jpg | BN2_2path_040.jpg | BN2_3path_040.jpg | 0.23965 | 0.58592 | 1 | 0.089879 | 0.24026 | 0.42817 | 0.13106 | 0.35775 | 0.57231 |
bn041.txt | BN1_041.jpg | BN2_1path_041.jpg | BN2_2path_041.jpg | BN2_3path_041.jpg | 0.41117 | 1 | 1 | 0.13431 | 0.38843 | 0.42956 | 0.13547 | 0.39102 | 0.43132 |
bn042.txt | BN1_042.jpg | BN2_1path_042.jpg | BN2_2path_042.jpg | BN2_3path_042.jpg | 0.37256 | 0.83442 | 0.90584 | 0.17247 | 0.45772 | 0.53173 | 0.27501 | 0.61857 | 0.68549 |
bn043.txt | BN1_043.jpg | BN2_1path_043.jpg | BN2_2path_043.jpg | BN2_3path_043.jpg | 0.27911 | 0.68064 | 0.80388 | 0.1344 | 0.37091 | 0.42675 | 0.1344 | 0.37091 | 0.42675 |
bn044.txt | BN1_044.jpg | BN2_1path_044.jpg | BN2_2path_044.jpg | BN2_3path_044.jpg | 0.473 | 1 | 1 | 0.14526 | 0.43713 | 0.47374 | 0.14997 | 0.44984 | 0.48702 |
bn045.txt | BN1_045.jpg | BN2_1path_045.jpg | BN2_2path_045.jpg | BN2_3path_045.jpg | 0.29555 | 0.8543 | 1 | 0.12941 | 0.363 | 0.51283 | 0.1599 | 0.42853 | 0.59266 |
bn046.txt | BN1_046.jpg | BN2_1path_046.jpg | BN2_2path_046.jpg | BN2_3path_046.jpg | 0.4008 | 0.89681 | 0.94863 | 0.16089 | 0.43899 | 0.58675 | 0.21013 | 0.52961 | 0.66428 |
bn047.txt | BN1_047.jpg | BN2_1path_047.jpg | BN2_2path_047.jpg | BN2_3path_047.jpg | 0.36341 | 0.82456 | 0.97619 | 0.1389 | 0.37916 | 0.42591 | 0.19531 | 0.5335 | 0.5807 |
bn048.txt | BN1_048.jpg | BN2_1path_048.jpg | BN2_2path_048.jpg | BN2_3path_048.jpg | 0.39158 | 1 | 1 | 0.14762 | 0.385 | 0.47109 | 0.17204 | 0.44654 | 0.56638 |
bn049.txt | BN1_049.jpg | BN2_1path_049.jpg | BN2_2path_049.jpg | BN2_3path_049.jpg | 0.53332 | 0.81367 | 1 | 0.14779 | 0.41934 | 0.49962 | 0.17382 | 0.46705 | 0.50464 |
bn050.txt | BN1_050.jpg | BN2_1path_050.jpg | BN2_2path_050.jpg | BN2_3path_050.jpg | 0.28052 | 0.96753 | 0.96753 | 0.13199 | 0.36489 | 0.48063 | 0.1524 | 0.40557 | 0.53901 |
bn051.txt | BN1_051.jpg | BN2_1path_051.jpg | BN2_2path_051.jpg | BN2_3path_051.jpg | 0.27273 | 0.92984 | 0.92984 | 0.18102 | 0.53167 | 0.55046 | 0.24061 | 0.65548 | 0.72248 |
bn052.txt | BN1_052.jpg | BN2_1path_052.jpg | BN2_2path_052.jpg | BN2_3path_052.jpg | 0.31294 | 0.84884 | 1 | 0.11972 | 0.36472 | 0.42747 | 0.12547 | 0.37936 | 0.44132 |
bn053.txt | BN1_053.jpg | BN2_1path_053.jpg | BN2_2path_053.jpg | BN2_3path_053.jpg | 0.36062 | 0.8694 | 0.94932 | 0.16882 | 0.41366 | 0.46629 | 0.24589 | 0.60215 | 0.60645 |
bn054.txt | BN1_054.jpg | BN2_1path_054.jpg | BN2_2path_054.jpg | BN2_3path_054.jpg | 0.35965 | 0.78205 | 1 | 0.14766 | 0.37854 | 0.47313 | 0.19767 | 0.49325 | 0.61839 |
bn055.txt | BN1_055.jpg | BN2_1path_055.jpg | BN2_2path_055.jpg | BN2_3path_055.jpg | 0.33943 | 0.75374 | 0.84193 | 0.15978 | 0.39679 | 0.47427 | 0.2417 | 0.55891 | 0.6154 |
bn056.txt | BN1_056.jpg | BN2_1path_056.jpg | BN2_2path_056.jpg | BN2_3path_056.jpg | 0.31812 | 0.8603 | 0.87275 | 0.15581 | 0.38322 | 0.4806 | 0.18254 | 0.49209 | 0.58602 |
bn057.txt | BN1_057.jpg | BN2_1path_057.jpg | BN2_2path_057.jpg | BN2_3path_057.jpg | 0.39994 | 1 | 1 | 0.15354 | 0.43396 | 0.49962 | 0.22561 | 0.66557 | 0.66058 |
bn058.txt | BN1_058.jpg | BN2_1path_058.jpg | BN2_2path_058.jpg | BN2_3path_058.jpg | 0.36314 | 0.92141 | 0.92141 | 0.18114 | 0.44881 | 0.50617 | 0.22886 | 0.57261 | 0.57414 |
bn059.txt | BN1_059.jpg | BN2_1path_059.jpg | BN2_2path_059.jpg | BN2_3path_059.jpg | 0.37044 | 1 | 1 | 0.15018 | 0.37162 | 0.54291 | 0.18015 | 0.45906 | 0.66419 |
bn060.txt | BN1_060.jpg | BN2_1path_060.jpg | BN2_2path_060.jpg | BN2_3path_060.jpg | 0.4251 | 0.91956 | 0.91956 | 0.15998 | 0.44924 | 0.5589 | 0.21768 | 0.61364 | 0.71353 |
bn061.txt | BN1_061.jpg | BN2_1path_061.jpg | BN2_2path_061.jpg | N/A | 0.54859 | 0.91869 | NaN | 0.14542 | 0.46655 | NaN | 0.15496 | 0.48557 | NaN |
bn062.txt | BN1_062.jpg | BN2_1path_062.jpg | BN2_2path_062.jpg | N/A | 0.1229 | 1 | NaN | 0.050594 | 0.56941 | NaN | 0.055479 | 0.73891 | NaN |
bn063.txt | BN1_063.jpg | BN2_1path_063.jpg | BN2_2path_063.jpg | N/A | 0.33266 | 1 | NaN | 0.12871 | 0.5203 | NaN | 0.15053 | NaN | NaN |
bn064.txt | BN1_064.jpg | BN2_1path_064.jpg | BN2_2path_064.jpg | N/A | 0.44196 | 1 | NaN | 0.099175 | NaN | NaN | 0.10532 | NaN | NaN |
bn065.txt | BN1_065.jpg | BN2_1path_065.jpg | BN2_2path_065.jpg | N/A | 0.34014 | 0.90422 | NaN | 0.14292 | NaN | NaN | 0.14626 | NaN | NaN |
bn066.txt | BN1_066.jpg | BN2_1path_066.jpg | BN2_2path_066.jpg | N/A | 0.63872 | 1 | NaN | 0.14717 | 0.35324 | NaN | 0.17405 | NaN | NaN |
bn067.txt | BN1_067.jpg | BN2_1path_067.jpg | BN2_2path_067.jpg | N/A | 0.70552 | 1 | NaN | 0.082458 | 0.48061 | NaN | 0.09565 | 0.53541 | NaN |
bn068.txt | BN1_068.jpg | BN2_1path_068.jpg | BN2_2path_068.jpg | N/A | 0.087741 | 1 | NaN | 0.052715 | 0.47599 | NaN | 0.057623 | 0.59954 | NaN |
bn069.txt | BN1_069.jpg | BN2_1path_069.jpg | BN2_2path_069.jpg | N/A | 0.36343 | 1 | NaN | 0.10863 | NaN | NaN | 0.12228 | NaN | NaN |
bn070.txt | BN1_070.jpg | BN2_1path_070.jpg | BN2_2path_070.jpg | N/A | 0.80054 | 1 | NaN | 0.15038 | 0.47608 | NaN | 0.18158 | 0.57564 | NaN |
bn071.txt | BN1_071.jpg | BN2_1path_071.jpg | BN2_2path_071.jpg | N/A | 0.1227 | 1 | NaN | 0.051841 | 0.51971 | NaN | 0.058469 | 0.64739 | NaN |
bn072.txt | BN1_072.jpg | BN2_1path_072.jpg | BN2_2path_072.jpg | N/A | 0.36185 | 1 | NaN | 0.13392 | 0.57214 | NaN | 0.16493 | 0.62982 | NaN |
bn073.txt | BN1_073.jpg | BN2_1path_073.jpg | BN2_2path_073.jpg | N/A | 0.29702 | 0.75999 | NaN | 0.09673 | 0.58277 | NaN | 0.10238 | NaN | NaN |
bn074.txt | BN1_074.jpg | BN2_1path_074.jpg | BN2_2path_074.jpg | N/A | 0.32793 | 1 | NaN | 0.12337 | 0.58514 | NaN | 0.13988 | 0.62477 | NaN |
bn075.txt | BN1_075.jpg | BN2_1path_075.jpg | BN2_2path_075.jpg | N/A | 0.12146 | 1 | NaN | 0.049067 | 0.51533 | NaN | 0.053172 | 0.55202 | NaN |
bn076.txt | BN1_076.jpg | BN2_1path_076.jpg | BN2_2path_076.jpg | N/A | 0.43649 | 1 | NaN | 0.12479 | 0.56126 | NaN | 0.1361 | 0.6119 | NaN |
bn077.txt | BN1_077.jpg | BN2_1path_077.jpg | BN2_2path_077.jpg | N/A | 0.53538 | 1 | NaN | 0.12013 | 0.4931 | NaN | 0.14 | 0.66267 | NaN |
bn078.txt | BN1_078.jpg | BN2_1path_078.jpg | BN2_2path_078.jpg | N/A | 0.3076 | 1 | NaN | 0.13312 | 0.41786 | NaN | 0.14212 | NaN | NaN |
bn079.txt | BN1_079.jpg | BN2_1path_079.jpg | BN2_2path_079.jpg | N/A | 0.81586 | 1 | NaN | 0.15362 | 0.49473 | NaN | 0.17249 | 0.53377 | NaN |
bn080.txt | BN1_080.jpg | BN2_1path_080.jpg | BN2_2path_080.jpg | N/A | 0.73154 | 0.82728 | NaN | 0.13574 | 0.42617 | NaN | 0.15083 | 0.49162 | NaN |
bn081.txt | BN1_081.jpg | BN2_1path_081.jpg | BN2_2path_081.jpg | N/A | 0.30303 | 0.84394 | NaN | 0.091273 | 0.44199 | NaN | 0.11322 | 0.57372 | NaN |
bn082.txt | BN1_082.jpg | BN2_1path_082.jpg | BN2_2path_082.jpg | N/A | 0.35011 | 0.87813 | NaN | 0.13668 | 0.49002 | NaN | 0.18152 | 0.62071 | NaN |
bn083.txt | BN1_083.jpg | BN2_1path_083.jpg | BN2_2path_083.jpg | N/A | 0.37086 | 0.86341 | NaN | 0.12129 | 0.50773 | NaN | 0.23692 | NaN | NaN |
bn084.txt | BN1_084.jpg | BN2_1path_084.jpg | BN2_2path_084.jpg | N/A | 0.22789 | 0.69728 | NaN | 0.092874 | 0.45509 | NaN | 0.10535 | 0.5082 | NaN |
bn085.txt | BN1_085.jpg | BN2_1path_085.jpg | BN2_2path_085.jpg | N/A | 0.50501 | 1 | NaN | 0.11922 | 0.50011 | NaN | 0.14905 | 0.60253 | NaN |
bn086.txt | BN1_086.jpg | BN2_1path_086.jpg | BN2_2path_086.jpg | N/A | 0.50915 | 1 | NaN | 0.18661 | 0.52633 | NaN | 0.22605 | 0.64922 | NaN |
bn087.txt | BN1_087.jpg | BN2_1path_087.jpg | BN2_2path_087.jpg | N/A | 0.45799 | 0.91782 | NaN | 0.15108 | 0.49264 | NaN | 0.19992 | 0.57704 | NaN |
bn088.txt | BN1_088.jpg | BN2_1path_088.jpg | BN2_2path_088.jpg | N/A | 0.1619 | 0.7127 | NaN | 0.088502 | 0.41702 | NaN | 0.044444 | NaN | NaN |
bn089.txt | BN1_089.jpg | BN2_1path_089.jpg | BN2_2path_089.jpg | N/A | 0.32622 | 0.76436 | NaN | 0.11113 | 0.45802 | NaN | 0.27237 | NaN | NaN |
bn090.txt | BN1_090.jpg | BN2_1path_090.jpg | BN2_2path_090.jpg | N/A | 0.35011 | 0.89933 | NaN | 0.12928 | 0.56815 | NaN | 0.16409 | 0.69332 | NaN |
bn091.txt | BN1_091.jpg | BN2_1path_091.jpg | BN2_2path_091.jpg | N/A | 0.22686 | 0.56011 | NaN | 0.092379 | 0.33741 | NaN | 0.11961 | 0.39317 | NaN |
bn092.txt | BN1_092.jpg | BN2_1path_092.jpg | BN2_2path_092.jpg | N/A | 0.42463 | 0.86837 | NaN | 0.13306 | 0.58827 | NaN | 0.17438 | 0.73558 | NaN |
bn093.txt | BN1_093.jpg | BN2_1path_093.jpg | BN2_2path_093.jpg | N/A | 0.79234 | 0.94225 | NaN | 0.21714 | 0.55358 | NaN | 0.30724 | 0.64291 | NaN |
bn094.txt | BN1_094.jpg | BN2_1path_094.jpg | BN2_2path_094.jpg | N/A | 0.34797 | 1 | NaN | 0.11056 | 0.42775 | NaN | 0.14693 | 0.57401 | NaN |
bn095.txt | BN1_095.jpg | BN2_1path_095.jpg | BN2_2path_095.jpg | N/A | 0.27471 | 0.85029 | NaN | 0.10642 | 0.46902 | NaN | 0.13405 | 0.55055 | NaN |
bn096.txt | BN1_096.jpg | BN2_1path_096.jpg | BN2_2path_096.jpg | N/A | 0.16542 | 0.72455 | NaN | 0.087013 | 0.47951 | NaN | 0.085891 | NaN | NaN |
bn097.txt | BN1_097.jpg | BN2_1path_097.jpg | BN2_2path_097.jpg | N/A | 0.16935 | 0.8629 | NaN | 0.086864 | 0.49334 | NaN | 0.085377 | 0.57753 | NaN |
bn098.txt | BN1_098.jpg | BN2_1path_098.jpg | BN2_2path_098.jpg | N/A | 0.27629 | 0.81223 | NaN | 0.12038 | 0.49479 | NaN | 0.1538 | 0.62802 | NaN |
bn099.txt | BN1_099.jpg | BN2_1path_099.jpg | BN2_2path_099.jpg | N/A | 0.36891 | 0.8 | NaN | 0.11715 | 0.4013 | NaN | 0.16198 | 0.50543 | NaN |
bn100.txt | BN1_100.jpg | BN2_1path_100.jpg | BN2_2path_100.jpg | N/A | 0.22471 | 0.84324 | NaN | 0.093405 | 0.49069 | NaN | 0.10234 | 0.5571 | NaN |
bn101.txt | BN1_101.jpg | BN2_1path_101.jpg | BN2_2path_101.jpg | BN2_3path_101.jpg | 0.52756 | 1 | 1 | 0.1841 | 0.35512 | 0.38494 | 0.2454 | NaN | NaN |
bn102.txt | BN1_102.jpg | BN2_1path_102.jpg | BN2_2path_102.jpg | BN2_3path_102.jpg | 0.46293 | 1 | 1 | 0.17276 | NaN | NaN | 0.19209 | NaN | NaN |
bn103.txt | BN1_103.jpg | BN2_1path_103.jpg | BN2_2path_103.jpg | BN2_3path_103.jpg | 0.29427 | 0.6751 | 1 | 0.155 | 0.33073 | 0.5074 | 0.18699 | 0.46146 | 0.56231 |
bn104.txt | BN1_104.jpg | BN2_1path_104.jpg | BN2_2path_104.jpg | BN2_3path_104.jpg | 0.33218 | 0.78918 | 1 | 0.15274 | 0.34919 | 0.48917 | 0.20532 | 0.48754 | 0.6941 |
bn105.txt | BN1_105.jpg | BN2_1path_105.jpg | BN2_2path_105.jpg | BN2_3path_105.jpg | 0.48971 | 1 | 1 | 0.23259 | 0.4494 | 0.58448 | 0.2445 | 0.47728 | 0.6223 |
bn106.txt | BN1_106.jpg | BN2_1path_106.jpg | BN2_2path_106.jpg | BN2_3path_106.jpg | 0.49389 | 1 | 1 | 0.18235 | 0.47153 | 0.56713 | 0.19202 | 0.5092 | 0.57548 |
bn107.txt | BN1_107.jpg | BN2_1path_107.jpg | BN2_2path_107.jpg | BN2_3path_107.jpg | 0.39735 | 0.77065 | 1 | 0.11022 | 0.37098 | 0.46578 | 0.1551 | 0.45158 | 0.58578 |
bn108.txt | BN1_108.jpg | BN2_1path_108.jpg | BN2_2path_108.jpg | BN2_3path_108.jpg | 0.75676 | 1 | 1 | 0.15401 | 0.36364 | 0.51319 | 0.16705 | 0.38893 | 0.53455 |
bn109.txt | BN1_109.jpg | BN2_1path_109.jpg | BN2_2path_109.jpg | BN2_3path_109.jpg | 0.38324 | 0.77794 | 1 | 0.19196 | NaN | NaN | 0.22118 | NaN | NaN |
bn110.txt | BN1_110.jpg | BN2_1path_110.jpg | BN2_2path_110.jpg | BN2_3path_110.jpg | 0.67215 | 1 | 1 | 0.20042 | 0.31672 | 0.39309 | 0.24196 | 0.36969 | 0.45338 |
bn111.txt | BN1_111.jpg | BN2_1path_111.jpg | BN2_2path_111.jpg | BN2_3path_111.jpg | 0.33755 | 0.81453 | 1 | 0.15811 | 0.35246 | 0.60753 | 0.19676 | 0.46307 | 0.75006 |
bn112.txt | BN1_112.jpg | BN2_1path_112.jpg | BN2_2path_112.jpg | BN2_3path_112.jpg | 0.34612 | 0.61287 | 0.83907 | 0.21322 | 0.32396 | 0.42507 | 0.24709 | 0.42734 | 0.45895 |
bn113.txt | BN1_113.jpg | BN2_1path_113.jpg | BN2_2path_113.jpg | BN2_3path_113.jpg | 0.42679 | 0.83981 | 0.83981 | 0.096573 | NaN | NaN | 0.10718 | NaN | NaN |
bn114.txt | BN1_114.jpg | BN2_1path_114.jpg | BN2_2path_114.jpg | BN2_3path_114.jpg | 0.62277 | 1 | 1 | 0.19014 | 0.3613 | 0.45474 | 0.26789 | 0.49815 | 0.59501 |
bn115.txt | BN1_115.jpg | BN2_1path_115.jpg | BN2_2path_115.jpg | BN2_3path_115.jpg | 0.35756 | 0.92194 | 1 | 0.11776 | 0.34198 | 0.49731 | 0.14028 | 0.51801 | 0.72602 |
bn116.txt | BN1_116.jpg | BN2_1path_116.jpg | BN2_2path_116.jpg | N/A | 0.53516 | 1 | NaN | 0.2234 | 0.42751 | NaN | 0.27176 | 0.5224 | NaN |
bn117.txt | BN1_117.jpg | BN2_1path_117.jpg | BN2_2path_117.jpg | BN2_3path_117.jpg | 0.44033 | 1 | 1 | 0.17247 | 0.3718 | 0.45084 | 0.18862 | 0.49249 | 0.54503 |
bn118.txt | BN1_118.jpg | BN2_1path_118.jpg | BN2_2path_118.jpg | BN2_3path_118.jpg | 0.38771 | 0.82299 | 1 | 0.15162 | 0.41046 | 0.4617 | 0.15996 | 0.42738 | 0.47873 |
bn119.txt | BN1_119.jpg | BN2_1path_119.jpg | BN2_2path_119.jpg | BN2_3path_119.jpg | 0.85968 | 1 | 1 | 0.398 | NaN | NaN | 0.4185 | NaN | NaN |
bn120.txt | BN1_120.jpg | BN2_1path_120.jpg | BN2_2path_120.jpg | BN2_3path_120.jpg | 0.33858 | 1 | 1 | 0.12798 | 0.31051 | 0.35777 | 0.14513 | 0.36458 | 0.43301 |
bn121.txt | BN1_121.jpg | BN2_1path_121.jpg | BN2_2path_121.jpg | BN2_3path_121.jpg | 0.35417 | 0.82813 | 1 | 0.13901 | 0.51068 | 0.70262 | 0.19283 | 0.65205 | 0.76283 |
bn122.txt | BN1_122.jpg | BN2_1path_122.jpg | BN2_2path_122.jpg | BN2_3path_122.jpg | 0.21372 | 0.77802 | 0.86458 | 0.10877 | 0.45968 | 0.54063 | 0.1396 | 0.56244 | 0.63969 |
bn123.txt | BN1_123.jpg | BN2_1path_123.jpg | BN2_2path_123.jpg | BN2_3path_123.jpg | 0.27754 | 0.83261 | 0.83261 | 0.12103 | NaN | NaN | 0.13284 | NaN | NaN |
bn124.txt | BN1_124.jpg | BN2_1path_124.jpg | BN2_2path_124.jpg | BN2_3path_124.jpg | 0.21643 | 0.79682 | 0.85866 | 0.11884 | NaN | NaN | 0.13883 | NaN | NaN |
bn125.txt | BN1_125.jpg | BN2_1path_125.jpg | BN2_2path_125.jpg | BN2_3path_125.jpg | 0.14147 | 0.56742 | 0.56742 | 0.097648 | NaN | NaN | 0.10239 | NaN | NaN |
bn126.txt | BN1_126.jpg | BN2_1path_126.jpg | BN2_2path_126.jpg | BN2_3path_126.jpg | 0.40556 | 0.92323 | 1 | 0.12761 | 0.58611 | 0.66499 | 0.17942 | NaN | NaN |
bn127.txt | BN1_127.jpg | BN2_1path_127.jpg | BN2_2path_127.jpg | BN2_3path_127.jpg | 0.44538 | 0.75204 | 0.86129 | 0.20886 | 0.46071 | 0.53419 | 0.27918 | 0.5682 | 0.6102 |
bn128.txt | BN1_128.jpg | BN2_1path_128.jpg | BN2_2path_128.jpg | BN2_3path_128.jpg | 0.16048 | 0.81659 | 0.86026 | 0.093341 | 0.57816 | 0.63312 | NaN | NaN | NaN |
bn129.txt | BN1_129.jpg | BN2_1path_129.jpg | BN2_2path_129.jpg | BN2_3path_129.jpg | 0.16004 | 0.80945 | 0.86772 | 0.10527 | NaN | NaN | 0.10734 | NaN | NaN |
bn130.txt | BN1_130.jpg | BN2_1path_130.jpg | BN2_2path_130.jpg | BN2_3path_130.jpg | 0.12581 | 0.85622 | 1 | 0.086147 | 0.41664 | 0.51354 | 0.092535 | 0.47731 | 0.53941 |
bn131.txt | BN1_131.jpg | BN2_1path_131.jpg | BN2_2path_131.jpg | BN2_3path_131.jpg | 0.53744 | 0.77538 | 0.77538 | 0.32117 | 0.57744 | 0.51071 | 0.43372 | NaN | NaN |
bn132.txt | BN1_132.jpg | BN2_1path_132.jpg | BN2_2path_132.jpg | BN2_3path_132.jpg | 0.1405 | 0.80165 | 0.8168 | 0.10441 | NaN | NaN | 0.10698 | NaN | NaN |
bn133.txt | BN1_133.jpg | BN2_1path_133.jpg | BN2_2path_133.jpg | BN2_3path_133.jpg | 0.14731 | 0.974 | 1 | 0.1166 | NaN | NaN | 0.1278 | NaN | NaN |
bn134.txt | BN1_134.jpg | BN2_1path_134.jpg | BN2_2path_134.jpg | BN2_3path_134.jpg | 0.12412 | 0.97368 | 1 | 0.1067 | 0.38497 | 0.5605 | 0.11176 | 0.46942 | 0.82895 |
bn135.txt | BN1_135.jpg | BN2_1path_135.jpg | BN2_2path_135.jpg | BN2_3path_135.jpg | 0.12842 | 0.70208 | 0.85104 | 0.082287 | 0.35841 | 0.46907 | 0.0885 | 0.53476 | 0.5834 |
bn136.txt | BN1_136.jpg | BN2_1path_136.jpg | BN2_2path_136.jpg | BN2_3path_136.jpg | 0.12299 | 0.56015 | 0.56337 | 0.095261 | NaN | NaN | 0.097079 | NaN | NaN |
bn137.txt | BN1_137.jpg | BN2_1path_137.jpg | BN2_2path_137.jpg | BN2_3path_137.jpg | 0.2981 | 0.82898 | 0.86461 | 0.1505 | 0.53064 | 0.68634 | NaN | NaN | NaN |
bn138.txt | BN1_138.jpg | BN2_1path_138.jpg | BN2_2path_138.jpg | BN2_3path_138.jpg | 0.20903 | 0.96437 | 1 | 0.10232 | 0.50518 | 0.74581 | NaN | NaN | NaN |
bn139.txt | BN1_139.jpg | BN2_1path_139.jpg | BN2_2path_139.jpg | BN2_3path_139.jpg | 0.24786 | 0.73077 | 0.86538 | 0.10471 | 0.53483 | 0.61698 | 0.11507 | 0.62489 | 0.67726 |
bn140.txt | BN1_140.jpg | BN2_1path_140.jpg | BN2_2path_140.jpg | BN2_3path_140.jpg | 0.52856 | 1 | 1 | 0.19085 | 0.54611 | 0.67373 | 0.25883 | 0.63801 | 0.72221 |
Data_To_Genarte_BN1 = Truth Table of the Starting Boolean Network that provides the synthetic data
BN1 Diagram = State transition Diagram of the Starting Boolean Network
BN2_1path Diagram = State Transition Diagram of the BN with the highest similarity score inferred based on single path transitions
BN2_2path Diagram = State Transition Diagram of the BN with the highest similarity score inferred based on two path transitions
BN2_3path Diagram = State Transition Diagram of the BN with the highest similarity score inferred based on three path transitions
R_max_1path = Maximum similarity score for inferences based on single path transitions
R_max_2path = Maximum similarity score for inferences based on two path transitions
R_max_3path = Maximum similarity score for inferences based on three path transitions
R_mean_1path_4transitions = Mean similarity score for inferences based on single paths containing at least 4 transitions
R_mean_2path_4transitions = Mean similarity score for inferences based on two different paths each containing at least 4 transitions
R_mean_3path_4transitions = Mean similarity score for inferences based on three different paths each containing at least 4 transitions
R_mean_1path_5transitions = Mean similarity score for inferences based on single paths containing at least 5 transitions
R_mean_2path_5transitions = Mean similarity score for inferences based on two different paths containing at least 5 transitions
R_mean_3path_5transitions = Mean similarity score for inferences based on three different paths each containing at least 5 transitions
Any NaN values refer to cases where the constraints on the transitions were not feasible for that Boolean Network.
Comparison with REVEAL (Liang et al.) and MDL (Zhao et al.)
Data_To_Generate_BN1 | BN1 Diagram | BN2_Haider et al. Diagram | BN2 Zhao et al. Diagram | BN2 REVEAL Liang et al. Diagram | R Max Haider | R Zhao | R_REVEAL |